ind-application

Drafts FDA Investigational New Drug (IND) applications under 21 CFR Part 312, including Form 1571, Investigator's Brochure, clinical protocols, CMC sections, and nonclinical data packages. Use when preparing IND submissions, pre-IND packages, IND amendments, or clinical trial authorization documents.

11 stars

Best use case

ind-application is best used when you need a repeatable AI agent workflow instead of a one-off prompt.

Drafts FDA Investigational New Drug (IND) applications under 21 CFR Part 312, including Form 1571, Investigator's Brochure, clinical protocols, CMC sections, and nonclinical data packages. Use when preparing IND submissions, pre-IND packages, IND amendments, or clinical trial authorization documents.

Teams using ind-application should expect a more consistent output, faster repeated execution, less prompt rewriting.

When to use this skill

  • You want a reusable workflow that can be run more than once with consistent structure.

When not to use this skill

  • You only need a quick one-off answer and do not need a reusable workflow.
  • You cannot install or maintain the underlying files, dependencies, or repository context.

Installation

Claude Code / Cursor / Codex

$curl -o ~/.claude/skills/ind-application/SKILL.md --create-dirs "https://raw.githubusercontent.com/CaseMark/skills/main/skills/legal/ind-application/SKILL.md"

Manual Installation

  1. Download SKILL.md from GitHub
  2. Place it in .claude/skills/ind-application/SKILL.md inside your project
  3. Restart your AI agent — it will auto-discover the skill

How ind-application Compares

Feature / Agentind-applicationStandard Approach
Platform SupportNot specifiedLimited / Varies
Context Awareness High Baseline
Installation ComplexityUnknownN/A

Frequently Asked Questions

What does this skill do?

Drafts FDA Investigational New Drug (IND) applications under 21 CFR Part 312, including Form 1571, Investigator's Brochure, clinical protocols, CMC sections, and nonclinical data packages. Use when preparing IND submissions, pre-IND packages, IND amendments, or clinical trial authorization documents.

Where can I find the source code?

You can find the source code on GitHub using the link provided at the top of the page.

SKILL.md Source

# IND Application

Drafts a complete IND application under 21 CFR Part 312 for FDA authorization to begin human clinical trials.

## Prerequisites

Collect before drafting:

1. **Drug substance/product info** — chemical name, code designation, structural formula, mechanism of action
2. **Nonclinical reports** — pharmacology, toxicology, PK/PD data
3. **CMC data** — manufacturing process, specifications, stability, certificates of analysis
4. **Clinical protocol(s)** — design, objectives, endpoints, statistical analysis plan
5. **Investigator info** — CVs, Form FDA 1572, clinical site details
6. **Prior human experience** (if any) — foreign trials, literature, compassionate use
7. **IRB documentation** — approval letters or submission plans, informed consent forms

## Quick Start

1. Confirm trial phase (I/II/III) — this drives CMC depth and nonclinical requirements
2. Complete Form 1571 cover sheet
3. Draft sections in 21 CFR 312.23(a) order (see below)
4. Cross-reference all nonclinical citations to specific IND sections
5. Run checklists for Form 1571, IB, protocol, and environmental assessment

## IND Section Order (21 CFR 312.23(a))

| # | Section | Reference |
|---|---------|-----------|
| 1 | Cover Sheet — FDA Form 1571 | 312.23(a)(1) |
| 2 | Table of Contents — mirror regulatory numbering | 312.23(a)(2) |
| 3 | Introductory Statement — rationale, therapeutic purpose, investigational plan | 312.23(a)(3) |
| 4 | Investigator's Brochure — safety, efficacy, pharmacology, known risks | 312.23(a)(5) |
| 5 | Clinical Protocol(s) — design, dosing, safety monitoring, statistical plan | 312.23(a)(6) |
| 6 | CMC: Drug Substance — synthesis, specs, stability | 312.23(a)(7) |
| 7 | CMC: Drug Product — formulation, controls, container/closure, stability | 312.23(a)(7) |
| 8 | Pharmacology/Toxicology — PK, acute/chronic tox, repro tox, genotox | 312.23(a)(8) |
| 9 | Previous Human Experience — prior clinical data, foreign trials, literature | 312.23(a)(9) |
| 10 | Additional Information — IRB approvals, consent, investigator qualifications | 312.23(a)(10) |

## Key Checklists

### Form 1571

- [ ] Sponsor name, address, contact
- [ ] Drug name and code designations
- [ ] Trial phase (I, II, III)
- [ ] IND number (amendment) or "Initial"
- [ ] Serial number
- [ ] Indication(s) under investigation
- [ ] List of enclosed sections
- [ ] Authorized signature with date

### Investigator's Brochure

- [ ] Physical/chemical/pharmaceutical properties
- [ ] Nonclinical pharmacology summary
- [ ] Nonclinical PK and metabolism
- [ ] Nonclinical toxicology (tabulate: species, route, duration, NOAEL, findings)
- [ ] Clinical experience summary (if applicable)
- [ ] Known/anticipated adverse effects and precautions

### Clinical Protocol

- [ ] Title, protocol number, version/date
- [ ] Primary and secondary objectives
- [ ] Study design and phase
- [ ] Inclusion/exclusion criteria
- [ ] Dosing regimen with rationale
- [ ] Efficacy and safety endpoints
- [ ] Stopping rules and dose-limiting toxicity definitions
- [ ] Safety monitoring plan (AE reporting, DSMB if applicable)
- [ ] Statistical analysis plan with sample size justification

## Phase-Appropriate CMC Depth

| Phase | Drug Substance | Drug Product | Stability |
|-------|---------------|-------------|-----------|
| I | Synthetic route, preliminary specs, structure confirmation | Formulation description, basic controls | Abbreviated (cover trial duration) |
| II | Refined process, tightened specs, impurity profiles | Validation initiated, expanded controls | 6+ months accelerated + long-term |
| III | Full process validation, complete characterization | Full cGMP, container/closure validation | ICH-compliant program |

## Nonclinical Study Table Format

For each study, tabulate: study type, test facility (with GLP status), species/strain, route, dose levels, duration, NOAEL/NOEL, key findings, relevance to clinical dose.

## Environmental Assessment

- Most INDs qualify for categorical exclusion under 21 CFR 25.31(e)
- If claiming exclusion: cite the specific 21 CFR 25 provision with basis statement
- If exclusion does not apply: prepare assessment per 21 CFR Part 25 Subpart B

## Pitfalls and Checks

- **Verify FDA forms** — retrieve current Form 1571/1572 from fda.gov; versions update periodically
- **Phase-appropriate CMC** — do not over-document Phase I or under-document Phase III
- **Cross-reference internally** — protocol references to nonclinical data must cite specific IND section/page
- **GLP compliance** — pivotal safety studies require 21 CFR Part 58; flag and justify any non-GLP studies
- **No promotional language** — avoid unsupported efficacy claims; this is a scientific/regulatory document
- **Safety-first framing** — every section must demonstrate adequate basis for protecting human subjects
- **Confidential info** — mark trade secrets per 21 CFR 312.130 if sponsor requests
- **eCTD format** — for electronic submissions, organize per FDA eCTD Module 1–5 structure
- **Pre-IND feedback** — if a Type B pre-IND meeting occurred, address each FDA comment explicitly

Related Skills

writing-grant-applications-research

11
from CaseMark/skills

Structures NIH/foundation grant applications with specific aims, significance, and innovation sections. Use when writing research grants, preparing NIH applications, or structuring grant proposals.

managing-modifier-applications

11
from CaseMark/skills

Guides appropriate modifier use (25, 59, 76, 77, etc.) with documentation requirements. Use when applying CPT modifiers, justifying modifier use, or resolving modifier-related denials.

ss4-ein-application

11
from CaseMark/skills

Drafts IRS Form SS-4 (EIN Application) by extracting entity details from formation documents. Use when forming a new business entity, applying for a federal tax ID, or preparing EIN applications for corporations, LLCs, partnerships, or sole proprietorships.

npdes-permit-application

11
from CaseMark/skills

Drafts NPDES permit applications under the Clean Water Act (33 U.S.C. § 1342) for facilities discharging pollutants into U.S. waters. Covers initial, renewal, and modification applications with discharge characterization, treatment descriptions, water quality analysis, and monitoring programs. Use when drafting NPDES permits, discharge authorizations, point source permits, or CWA compliance filings.

nda-drug-application

11
from CaseMark/skills

Drafts an eCTD-compliant New Drug Application (NDA) for FDA submission under 21 CFR Part 314. Compiles clinical trial data, CMC documentation, nonclinical studies, pharmacokinetics, integrated safety analyses, and proposed labeling into five-module eCTD structure. Use when preparing an NDA, FDA drug approval submission, pharmaceutical regulatory filing, or eCTD assembly for a new molecular entity.

form-1023-application

11
from CaseMark/skills

Drafts IRS Form 1023 (Application for Recognition of Exemption) packages for 501(c)(3) applicants. Use when preparing Form 1023 filings, nonprofit tax-exempt applications, or 501(c)(3) submissions. Triggers: "Form 1023", "501(c)(3)", "tax-exempt status", "recognition of exemption".

analyzing-tokenization-applications

11
from CaseMark/skills

Evaluates real-world asset tokenization with legal structure, market infrastructure, and liquidity analysis. Use when analyzing tokenization, evaluating security tokens, or assessing asset digitization.

analyzing-blockchain-applications

11
from CaseMark/skills

Evaluates blockchain use cases in financial services with DLT assessment and implementation feasibility. Use when analyzing blockchain applications, evaluating DLT solutions, or assessing crypto infrastructure.

skill-name

11
from CaseMark/skills

Replace with a specific description of what this skill does and when to use it. Include keywords that help agents identify relevant tasks.

writing-surgical-consultation-notes

11
from CaseMark/skills

Creates structured surgical consultation responses with assessment and surgical candidacy determination. Use when responding to surgical consults, evaluating surgical candidates, or documenting surgical recommendations.

writing-operative-reports

11
from CaseMark/skills

Creates structured operative notes with findings, technique, specimens, and estimated blood loss. Use when dictating operative reports, documenting surgical procedures, or recording intraoperative findings.

writing-irb-submissions

11
from CaseMark/skills

Creates IRB submission packages with protocol summaries, consent forms, and risk-benefit analysis. Use when submitting to IRB, preparing ethics applications, or writing consent documents.