pubmed-search-mcp-harness
Cline harness for PubMed Search MCP. Triggers: pubmed search, literature search, unified_search, pipeline, fulltext, release checklist, Cline.
Best use case
pubmed-search-mcp-harness is best used when you need a repeatable AI agent workflow instead of a one-off prompt.
Cline harness for PubMed Search MCP. Triggers: pubmed search, literature search, unified_search, pipeline, fulltext, release checklist, Cline.
Teams using pubmed-search-mcp-harness should expect a more consistent output, faster repeated execution, less prompt rewriting.
When to use this skill
- You want a reusable workflow that can be run more than once with consistent structure.
When not to use this skill
- You only need a quick one-off answer and do not need a reusable workflow.
- You cannot install or maintain the underlying files, dependencies, or repository context.
Installation
Claude Code / Cursor / Codex
Manual Installation
- Download SKILL.md from GitHub
- Place it in
.claude/skills/pubmed-search-mcp-harness/SKILL.mdinside your project - Restart your AI agent — it will auto-discover the skill
How pubmed-search-mcp-harness Compares
| Feature / Agent | pubmed-search-mcp-harness | Standard Approach |
|---|---|---|
| Platform Support | Not specified | Limited / Varies |
| Context Awareness | High | Baseline |
| Installation Complexity | Unknown | N/A |
Frequently Asked Questions
What does this skill do?
Cline harness for PubMed Search MCP. Triggers: pubmed search, literature search, unified_search, pipeline, fulltext, release checklist, Cline.
Where can I find the source code?
You can find the source code on GitHub using the link provided at the top of the page.
SKILL.md Source
# PubMed Search MCP: Cline Harness Skill Use this skill when working in the PubMed Search MCP repository with Cline and you need a dependable loop for literature-search tools, pipeline behavior, and release checks. ## What To Use First - Rules: `.clinerules/` - Workflows: `.clinerules/workflows/` - Run `/pubmed-full-check.md` for local gates. - Run `/pubmed-skills-audit.md` after changing skills or rules. - Run `/pubmed-release-publish.md` for release prep. - User-facing research skills: `.claude/skills/pubmed-*` and `.claude/skills/pipeline-persistence`. - If a `.claude/skills` instruction conflicts with current implementation, prefer `.clinerules/`. ## Canonical Commands - Lint: `uv run ruff check .` - Format check: `uv run ruff format --check .` - Types: `uv run mypy src/ tests/` - Tests: `uv run pytest` - Tool docs sync: `uv run python scripts/count_mcp_tools.py --update-docs` - Skill audit: `python3 scripts/check_cline_skills.py` ## Research Guardrails - Prefer `unified_search` as the primary multi-source entrypoint. - Preserve session/pipeline state instead of relying on agent memory. - Respect NCBI email/API-key policy and institutional access configuration. - Keep exported citations reproducible: PMIDs, DOI, source, date filters, and query strategy matter.
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