clinical-trial-protocol-waypoint-file-formats
Sub-skill of clinical-trial-protocol: Waypoint File Formats (+2).
Best use case
clinical-trial-protocol-waypoint-file-formats is best used when you need a repeatable AI agent workflow instead of a one-off prompt.
Sub-skill of clinical-trial-protocol: Waypoint File Formats (+2).
Teams using clinical-trial-protocol-waypoint-file-formats should expect a more consistent output, faster repeated execution, less prompt rewriting.
When to use this skill
- You want a reusable workflow that can be run more than once with consistent structure.
When not to use this skill
- You only need a quick one-off answer and do not need a reusable workflow.
- You cannot install or maintain the underlying files, dependencies, or repository context.
Installation
Claude Code / Cursor / Codex
Manual Installation
- Download SKILL.md from GitHub
- Place it in
.claude/skills/waypoint-file-formats/SKILL.mdinside your project - Restart your AI agent — it will auto-discover the skill
How clinical-trial-protocol-waypoint-file-formats Compares
| Feature / Agent | clinical-trial-protocol-waypoint-file-formats | Standard Approach |
|---|---|---|
| Platform Support | Not specified | Limited / Varies |
| Context Awareness | High | Baseline |
| Installation Complexity | Unknown | N/A |
Frequently Asked Questions
What does this skill do?
Sub-skill of clinical-trial-protocol: Waypoint File Formats (+2).
Where can I find the source code?
You can find the source code on GitHub using the link provided at the top of the page.
SKILL.md Source
# Waypoint File Formats (+2) ## Waypoint File Formats **JSON Waypoints** (Steps 0, 1): - Structured data for programmatic access - Small file sizes (1-15KB) - Easy to parse and reference **Markdown Waypoints** (Steps 2, 3, 4): - Step 2: `02_protocol_foundation.md` (Sections 1-6) - Step 3: `03_protocol_intervention.md` (Sections 7-8) - Step 4: `04_protocol_operations.md` (Sections 9-12) - Step 4: `02_protocol_draft.md` (concatenated complete protocol) - Human-readable protocol documents - Can be directly edited by users - Individual section files preserved for easier regeneration ## Data Minimization Strategy Each step implements aggressive summarization: - **Keep:** Top-N results (5-10 max) - **Keep:** Key facts and IDs (NCT numbers, endpoint types) - **Keep:** Concise rationale (2-3 sentences) - **Discard:** Raw MCP query results (not needed after analysis) - **Discard:** Full FDA guidance text (only excerpts/citations kept) - **Discard:** Lower-ranked search results ## Step Independence Each subskill is designed to: - Read only from waypoint files (not conversation history) - Produce complete output in single execution - Not depend on conversation context from previous steps - Be runnable standalone
Related Skills
multi-file-tax-reconciliation-workflow
Systematic parallel review and reconciliation of multi-document tax filings with cross-reference validation
multi-file-tax-prep-orchestration
Structured approach to complex multi-file tax return preparation with traceability and planning
git-large-file-staging-conflict-recovery
Recover from pre-commit hook blocks on oversized files and corrupted rebase states during bulk repo syncs
freetaxusa-eefile-navigation-pattern
Handling session timeouts and navigating FreeTaxUSA's multi-step e-filing flow to the signature page
interactive-Codex-to-file-based-fallback
Switch from tmux/interactive Codex to file-based Codex -p execution when interactive runs fail with upstream errors or analysis-only stalls, then verify landing from git/GitHub state.
preserved-plan-refile-with-attested-review-wave
Reopen a previously closed GitHub issue with a preserved local plan, rewrite it into a conservative draft, and drive iterative attested adversarial review waves until it is truly approval-ready.
clinical-trial-protocol
Generate clinical trial protocols for medical devices or drugs through a modular, waypoint-based architecture with research-only and full protocol modes.
github-comment-body-file-safety
Prevent shell-quoting and command-substitution bugs when posting GitHub issue/PR comments or editing bodies with gh CLI.
orcaflex-file-conversion
Convert OrcaFlex files between formats (.dat, .yml, .sim) for digital analysis and automation. Supports bidirectional conversion, batch processing, and format standardization.
worker-discovery-protocol
Protocol for workers to capture and propagate discoveries back to the orchestrator and shared knowledge base. Phase 3 of orchestrator/worker context enforcement (#2020).
closed-issue-plan-refile-loop
Reopen and re-drive a previously closed GitHub plan issue after review/governance blockers are fixed, without prematurely restoring approval state.
repo-cleanup-list-untracked-files
Sub-skill of repo-cleanup: List Untracked Files (+3).