instrument-data-allotrope-validation

Sub-skill of instrument-data-allotrope: Validation.

5 stars

Best use case

instrument-data-allotrope-validation is best used when you need a repeatable AI agent workflow instead of a one-off prompt.

Sub-skill of instrument-data-allotrope: Validation.

Teams using instrument-data-allotrope-validation should expect a more consistent output, faster repeated execution, less prompt rewriting.

When to use this skill

  • You want a reusable workflow that can be run more than once with consistent structure.

When not to use this skill

  • You only need a quick one-off answer and do not need a reusable workflow.
  • You cannot install or maintain the underlying files, dependencies, or repository context.

Installation

Claude Code / Cursor / Codex

$curl -o ~/.claude/skills/validation/SKILL.md --create-dirs "https://raw.githubusercontent.com/vamseeachanta/workspace-hub/main/.agents/skills/_archive/science/bio-research/instrument-data-allotrope/validation/SKILL.md"

Manual Installation

  1. Download SKILL.md from GitHub
  2. Place it in .claude/skills/validation/SKILL.md inside your project
  3. Restart your AI agent — it will auto-discover the skill

How instrument-data-allotrope-validation Compares

Feature / Agentinstrument-data-allotrope-validationStandard Approach
Platform SupportNot specifiedLimited / Varies
Context Awareness High Baseline
Installation ComplexityUnknownN/A

Frequently Asked Questions

What does this skill do?

Sub-skill of instrument-data-allotrope: Validation.

Where can I find the source code?

You can find the source code on GitHub using the link provided at the top of the page.

SKILL.md Source

# Validation

## Validation


Always validate ASM output before delivering to the user:

```bash
python scripts/validate_asm.py output.json
python scripts/validate_asm.py output.json --reference known_good.json  # Compare to reference
python scripts/validate_asm.py output.json --strict  # Treat warnings as errors
```

**Validation Rules:**
- Based on Allotrope ASM specification (December 2024)
- Last updated: 2026-01-07
- Source: https://gitlab.com/allotrope-public/asm

**Soft Validation Approach:**
Unknown techniques, units, or sample roles generate **warnings** (not errors) to allow for forward compatibility. If Allotrope adds new values after December 2024, the validator won't block them--it will flag them for manual verification. Use `--strict` mode to treat warnings as errors if you need stricter validation.

**What it checks:**
- Correct technique selection (e.g., multi-analyte profiling vs plate reader)
- Field naming conventions (space-separated, not hyphenated)
- Calculated data has traceability (`data-source-aggregate-document`)
- Unique identifiers exist for measurements and calculated values
- Required metadata present
- Valid units and sample roles (with soft validation for unknown values)

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