nextflow-pipelines-check-completion
Sub-skill of nextflow-pipelines: Check completion (+1).
Best use case
nextflow-pipelines-check-completion is best used when you need a repeatable AI agent workflow instead of a one-off prompt.
Sub-skill of nextflow-pipelines: Check completion (+1).
Teams using nextflow-pipelines-check-completion should expect a more consistent output, faster repeated execution, less prompt rewriting.
When to use this skill
- You want a reusable workflow that can be run more than once with consistent structure.
When not to use this skill
- You only need a quick one-off answer and do not need a reusable workflow.
- You cannot install or maintain the underlying files, dependencies, or repository context.
Installation
Claude Code / Cursor / Codex
Manual Installation
- Download SKILL.md from GitHub
- Place it in
.claude/skills/check-completion/SKILL.mdinside your project - Restart your AI agent — it will auto-discover the skill
How nextflow-pipelines-check-completion Compares
| Feature / Agent | nextflow-pipelines-check-completion | Standard Approach |
|---|---|---|
| Platform Support | Not specified | Limited / Varies |
| Context Awareness | High | Baseline |
| Installation Complexity | Unknown | N/A |
Frequently Asked Questions
What does this skill do?
Sub-skill of nextflow-pipelines: Check completion (+1).
Where can I find the source code?
You can find the source code on GitHub using the link provided at the top of the page.
SKILL.md Source
# Check completion (+1) ## Check completion ```bash ls results/multiqc/multiqc_report.html grep "Pipeline completed successfully" .nextflow.log ``` ## Key outputs by pipeline **rnaseq:** - `results/star_salmon/salmon.merged.gene_counts.tsv` - Gene counts - `results/star_salmon/salmon.merged.gene_tpm.tsv` - TPM values **sarek:** - `results/variant_calling/*/` - VCF files - `results/preprocessing/recalibrated/` - BAM files **atacseq:** - `results/macs2/narrowPeak/` - Peak calls - `results/bwa/mergedLibrary/bigwig/` - Coverage tracks ---
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