nextflow-pipelines-docker-issues
Sub-skill of nextflow-pipelines: Docker issues (+2).
Best use case
nextflow-pipelines-docker-issues is best used when you need a repeatable AI agent workflow instead of a one-off prompt.
Sub-skill of nextflow-pipelines: Docker issues (+2).
Teams using nextflow-pipelines-docker-issues should expect a more consistent output, faster repeated execution, less prompt rewriting.
When to use this skill
- You want a reusable workflow that can be run more than once with consistent structure.
When not to use this skill
- You only need a quick one-off answer and do not need a reusable workflow.
- You cannot install or maintain the underlying files, dependencies, or repository context.
Installation
Claude Code / Cursor / Codex
Manual Installation
- Download SKILL.md from GitHub
- Place it in
.claude/skills/docker-issues/SKILL.mdinside your project - Restart your AI agent — it will auto-discover the skill
How nextflow-pipelines-docker-issues Compares
| Feature / Agent | nextflow-pipelines-docker-issues | Standard Approach |
|---|---|---|
| Platform Support | Not specified | Limited / Varies |
| Context Awareness | High | Baseline |
| Installation Complexity | Unknown | N/A |
Frequently Asked Questions
What does this skill do?
Sub-skill of nextflow-pipelines: Docker issues (+2).
Where can I find the source code?
You can find the source code on GitHub using the link provided at the top of the page.
SKILL.md Source
# Docker issues (+2) ## Docker issues | Problem | Fix | |---------|-----| | Not installed | Install from https://docs.docker.com/get-docker/ | | Permission denied | `sudo usermod -aG docker $USER` then re-login | | Daemon not running | `sudo systemctl start docker` | ## Nextflow issues | Problem | Fix | |---------|-----| | Not installed | `curl -s https://get.nextflow.io \| bash && mv nextflow ~/bin/` | | Version < 23.04 | `nextflow self-update` | ## Java issues | Problem | Fix | |---------|-----| | Not installed / < 11 | `sudo apt install openjdk-11-jdk` | **Do not proceed until all checks pass.** For HPC/Singularity, see [references/troubleshooting.md](references/troubleshooting.md). ---
Related Skills
parallel-llm-wiki-gap-to-issues
Use parallel subagents to mine remaining LLM-wiki/document-intelligence gaps, de-duplicate against existing GitHub issues, then create only the strongest bounded follow-on issues.
llm-wiki-ecosystem-gap-to-issues
Review the workspace-hub LLM-wiki/document-intelligence ecosystem, identify high-leverage gaps, and create grounded GitHub feature issues without duplicating existing work.
nextflow-pipelines
Run nf-core bioinformatics pipelines (rnaseq, sarek, atacseq) on sequencing data for gene expression, variant calling, and chromatin accessibility analyses.
github-visual-planning-issues
Create review-friendly GitHub planning issues that supersede stale/seasonal issues and include source-backed image thumbnails for faster human review.
github-issues
Create, manage, triage, and close GitHub issues. Search existing issues, add labels, assign people, and link to PRs. Works with gh CLI or falls back to git + GitHub REST API via curl.
extract-learnings-to-issues
Extract unstructured user reflections and learnings, distill core themes, route insights to existing GitHub issues as contextual comments rather than creating duplicates.
nextflow-pipelines-workflow-checklist
Sub-skill of nextflow-pipelines: Workflow Checklist.
nextflow-pipelines-step-3-run-test-profile
Sub-skill of nextflow-pipelines: Step 3: Run Test Profile.
nextflow-pipelines-step-2-select-pipeline
Sub-skill of nextflow-pipelines: Step 2: Select Pipeline.
nextflow-pipelines-step-0-acquire-data-geosra-only
Sub-skill of nextflow-pipelines: Step 0: Acquire Data (GEO/SRA Only).
nextflow-pipelines-licenses
Sub-skill of nextflow-pipelines: Licenses.
nextflow-pipelines-generate-automatically
Sub-skill of nextflow-pipelines: Generate automatically (+2).