biomedical-skills

24 biomedical research skills. Trigger: medical research, clinical trials, genomics, bioinformatics. Design: domain databases, wet-lab/dry-lab methods, and ethical compliance guides.

191 stars

Best use case

biomedical-skills is best used when you need a repeatable AI agent workflow instead of a one-off prompt.

24 biomedical research skills. Trigger: medical research, clinical trials, genomics, bioinformatics. Design: domain databases, wet-lab/dry-lab methods, and ethical compliance guides.

Teams using biomedical-skills should expect a more consistent output, faster repeated execution, less prompt rewriting.

When to use this skill

  • You want a reusable workflow that can be run more than once with consistent structure.

When not to use this skill

  • You only need a quick one-off answer and do not need a reusable workflow.
  • You cannot install or maintain the underlying files, dependencies, or repository context.

Installation

Claude Code / Cursor / Codex

$curl -o ~/.claude/skills/biomedical/SKILL.md --create-dirs "https://raw.githubusercontent.com/wentorai/research-plugins/main/skills/domains/biomedical/SKILL.md"

Manual Installation

  1. Download SKILL.md from GitHub
  2. Place it in .claude/skills/biomedical/SKILL.md inside your project
  3. Restart your AI agent — it will auto-discover the skill

How biomedical-skills Compares

Feature / Agentbiomedical-skillsStandard Approach
Platform SupportNot specifiedLimited / Varies
Context Awareness High Baseline
Installation ComplexityUnknownN/A

Frequently Asked Questions

What does this skill do?

24 biomedical research skills. Trigger: medical research, clinical trials, genomics, bioinformatics. Design: domain databases, wet-lab/dry-lab methods, and ethical compliance guides.

Where can I find the source code?

You can find the source code on GitHub using the link provided at the top of the page.

SKILL.md Source

# Biomedical Research — 24 Skills

Select the skill matching the user's need, then `read` its SKILL.md.

| Skill | Description |
|-------|-------------|
| [alphafold-api](./alphafold-api/SKILL.md) | Query AlphaFold protein structure predictions by UniProt accession |
| [bioagents-guide](./bioagents-guide/SKILL.md) | AI scientist framework for autonomous biological research workflows |
| [biothings-api](./biothings-api/SKILL.md) | Query gene, variant, and drug annotations via BioThings APIs |
| [clawbio-guide](./clawbio-guide/SKILL.md) | OpenClaw bioinformatics skill library for genomics pipelines |
| [clinical-dialogue-agents-guide](./clinical-dialogue-agents-guide/SKILL.md) | Papers on AI agents for clinical dialogue and medical QA |
| [clinical-research-guide](./clinical-research-guide/SKILL.md) | Design clinical studies and report using CONSORT, STROBE guidelines |
| [clinicaltrials-api](./clinicaltrials-api/SKILL.md) | Clinical trial registry database search API |
| [clinicaltrials-api-v2](./clinicaltrials-api-v2/SKILL.md) | Search and analyze clinical trials via the ClinicalTrials.gov v2 API |
| [ena-sequence-api](./ena-sequence-api/SKILL.md) | Access nucleotide sequence data from the European Nucleotide Archive |
| [enrichr-api](./enrichr-api/SKILL.md) | Perform gene set enrichment analysis using the Enrichr API |
| [ensembl-rest-api](./ensembl-rest-api/SKILL.md) | Query gene, sequence, and variant data via the Ensembl REST API |
| [epidemiology-guide](./epidemiology-guide/SKILL.md) | Epidemiological study designs, measures of association, and public health ana... |
| [genomas-guide](./genomas-guide/SKILL.md) | Automate gene expression analysis with the GenoMAS multi-agent system |
| [genomics-analysis-guide](./genomics-analysis-guide/SKILL.md) | Workflows for RNA-seq, GWAS, and variant calling in genomic research |
| [genotex-benchmark-guide](./genotex-benchmark-guide/SKILL.md) | Benchmark for LLM agents on gene expression data analysis |
| [med-researcher-guide](./med-researcher-guide/SKILL.md) | Multi-agent system for biomedical literature review and synthesis |
| [med-researcher-r1-guide](./med-researcher-r1-guide/SKILL.md) | Medical deep research agent with reasoning chain analysis |
| [medgeclaw-guide](./medgeclaw-guide/SKILL.md) | AI research assistant for biomedicine, RNA-seq, and drug discovery |
| [medical-data-api](./medical-data-api/SKILL.md) | Access FDA drug data and WHO global health statistics for research |
| [medical-imaging-guide](./medical-imaging-guide/SKILL.md) | Medical image analysis with deep learning for research applications |
| [ncbi-blast-api](./ncbi-blast-api/SKILL.md) | Run sequence similarity searches via the NCBI BLAST REST API |
| [ncbi-datasets-api](./ncbi-datasets-api/SKILL.md) | Access genomes, genes, and taxonomy data via NCBI Datasets v2 API |
| [pdb-structure-api](./pdb-structure-api/SKILL.md) | Search and retrieve 3D protein structures from the RCSB Protein Data Bank |
| [quickgo-api](./quickgo-api/SKILL.md) | Browse and search Gene Ontology annotations via the QuickGO API |

Related Skills

polish-skills

191
from wentorai/research-plugins

9 editing & proofreading skills. Trigger: polishing drafts, academic tone, proofreading, translation. Design: style checkers and editing workflows for clear, concise academic English.

latex-skills

191
from wentorai/research-plugins

11 latex skills. Trigger: LaTeX typesetting, formatting papers, mathematical notation, Beamer. Design: template-based guides with package recommendations and compilation tips.

composition-skills

191
from wentorai/research-plugins

9 academic writing skills. Trigger: writing paper sections, structuring arguments, academic prose. Design: section-by-section guides (abstract, intro, methods, discussion) with templates.

citation-skills

191
from wentorai/research-plugins

22 citation management skills. Trigger: managing references, formatting citations, BibTeX, bibliographies. Design: reference manager integrations and citation style guides (APA, IEEE, etc.).

scraping-skills

191
from wentorai/research-plugins

6 web scraping & data collection skills. Trigger: collecting web data, finding datasets, API access for research. Design: ethical scraping methods with rate limiting and data quality checks.

ocr-translate-skills

191
from wentorai/research-plugins

7 ocr & translation skills. Trigger: scanning documents, recognizing formulas, translating academic papers. Design: specialized OCR (LaTeX, handwriting) and translation for scholarly content.

knowledge-graph-skills

191
from wentorai/research-plugins

9 knowledge graphs skills. Trigger: building knowledge graphs, connecting concepts, ontology design. Design: graph construction, traversal, and visualization for research knowledge.

document-skills

191
from wentorai/research-plugins

10 document processing skills. Trigger: extracting text from PDFs, parsing references, document Q&A. Design: parsing pipelines (GROBID, marker) and structured extraction tools.

diagram-skills

191
from wentorai/research-plugins

9 diagrams & visuals skills. Trigger: creating diagrams, flowcharts, architecture visuals, LaTeX drawings. Design: tool-specific guides (Mermaid, Excalidraw, TikZ) with academic conventions.

code-exec-skills

191
from wentorai/research-plugins

7 code execution skills. Trigger: running code, interactive notebooks, Jupyter, Colab, sandboxed execution. Design: execution environment guides with setup instructions and best practices.

paper-review-skills

191
from wentorai/research-plugins

8 peer review skills. Trigger: reviewing manuscripts, comparing papers, quality assessment. Design: systematic review criteria, evaluation rubrics, and automated review tools.

methodology-skills

191
from wentorai/research-plugins

12 research methodology skills. Trigger: study design, methodology selection, scientific reasoning, mentoring. Design: rigorous methods frameworks covering qualitative, quantitative, and mixed approaches.